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Evolutionary Analysis: Global Edition

Jon C. Herron, Scott Freeman, Jason Hodin

Chapter 5

Variation Among Individuals - all with Video Answers

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Chapter Questions

02:21

Problem 1

What is the difference between genetic variation, environmental variation, and genotype-by-environment interaction? Give examples of each. Try to think of potential examples not covered in this chapter.

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02:48

Problem 2

We noted on the first page of the chapter that humans vary considerably in height. State a hypothesis about whether this reflects genetic variation, environmental variation, or genotype-by-environment interaction (any hypothesis is okay). What kinds of evidence might settle the question? Are there experiments that, at least in principle, would decide the matter? Would it be easier to do
them with another species, such as mice?

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02:02

Problem 3

Honey bees demonstrate morphological variations depending on the division of labor among the various morphotypes. Worker bees are quite different morphologically from the queens, who are different from the drones. Can you comment on which type of variation this might be, and the basis behind this variation?

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01:07

Problem 4

What are reaction norms, and why do they matter? Draw your own reaction norm for mood as a function of the temperature outside. What kind of variation allows reaction norms to evolve?

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04:38

Problem 5

The smallest possible mutation, point mutation where one base pair is substituted for another, can have a variety of effects. Some mutations result in a synonymous substitution, others result in a nonsynonymous substitution, and some are nonsense mutations. Explain these mutations using examples not given in the chapter. What are their effects on the functions of the affected proteins?

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05:00

Problem 6

Consider a population containing the following genotypes: $A a, A a, A A, a A, a a, A a, a a, a A, a a, A a .$ What is the frequency of genotype aa? Allele $A$ ? Allele $a$ ? Can you tell which genotype is most advantageous? Can you tell whether $A a$ resembles $A A$ or aa? Why or why not?

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00:19

Problem 7

If a population shows declining average fitness over time, is it being acted upon by lethal mutation or by natural selection?

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02:28

Problem 8

Diagram two processes through which genes can be duplicated. How can you tell whether a duplicate copy of a gene arose by unequal crossing over or retroposition?

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01:03

Problem 9

If a gene gets retroduplicated, how can you distinguish the original gene from the copy?

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00:50

Problem 10

How do chromosome inversions happen? What consequences do they have for the evolution of populations?

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01:02

Problem 11

Diagram the sequence of events that leads to the formation of second-generation polyploid individuals in plants that can self-fertilize.

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01:09

Problem 12

Discuss factors that might cause mutation rates to vary among individuals in populations, and among species.

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02:30

Problem 13

Genotype-by-environment interactions can serve as raw materialfor the evolution of reaction norms. Choose an example from the chapter and graphically represent evolution of reaction norms because of genotype-by-environment interaction.

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01:22

Problem 14

Compare and contrast the evolutionary roles of point mutations, chromosome inversions, gene duplications, and polyploidization.

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01:52

Problem 15

Suppose a silent mutation occurs in an exon that is part of the gene for TAS2R 38 in a human. Has a new allele been created? Defend your answer.

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02:39

Problem 16

Mutations are supposed to play an important role in evolution. On a per-nucleotide basis, mutation rates have been found to be very small. Moreover, the genomes are sufficiently large. However, every individual carries a number of new mutations. Some of these are lethal. Typically, even more are neutral or nearly so. Most of the rest are deleterious. But some of these mutations, perhaps more than we might have expected, are beneficial to individuals. Comment on the following three hypotheses:
a. In the absence of natural selection, deleterious mutations accumulate and the average fitness of populations decline. With natural selection, however, beneficial mutations can accumulate and mean fitness can rise.
b. Organisms exposed to adverse environmental conditions display greater rates of mutation.
c. Mutation rates vary depending on the loci in a genome

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01:14

Problem 17

Chromosome number can evolve by smaller-scale changes than duplication of entire chromosome sets. For example, domestic horses have 64 chromosomes per diploid set while Przewalski's horse, an Asian subspecies, has $66 .$ Przewalski's horse is thought to have evolved from an ancestor with $2 n=64$ chromosomes. The question is: Where did its extra chromosome pair originate? It seems unlikely that an entirely new chromosome pair was created from scratch in Przewalski's horse. To generate a hypothesis explaining the origin of the new chromosome in Przewalski's horse, examine the adjacent figure. The drawing at right shows how certain chromosomes synapse in the hybrid offspring of a domestic horse-Przewalski's horse mating (Short et al. 1974 ). The remaining chromosomes show a normal 1: 1 pairing. Do you think this sort of gradual change in chromosome number involves a change in the actual number of genes present, or just rearrangement of the same number of genes?

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02:58

Problem 18

Some evolutionary geneticists have suggested that the genetic code has been shaped by natural selection to minimize the deleterious consequences of mutations. For an entry into the literature on this issue, see:

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00:27

Problem 19

We discussed temperature-dependent sex determination in geckos. Many other reptiles have environmental sex determination as well. For a paper exploring why temperature-dependent sex determination might be adaptive, see:

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00:30

Problem 20

Figure 5.12 presented evidence that people with certain genotypes for the serotonin transporter gene are more sensitive to maltreatment during childhood. For an exploration of possible benefits associated with the sensitive genotype, see:

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00:38

Problem 21

For an example of chromosomal rearangements maintaining a supergene with multiple alleles, see:

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00:40

Problem 22

For an estimate of the number of loss-of-function $\mathrm{mu}-$tations present in the genome of a typical human, see:

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00:41

Problem 23

Are there circumstances under which it is good to have a high mutation rate? See:

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00:25

Problem 24

For evidence that new genes may evolve from scratch more often than previously thought, see:

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