Question
Draw a diagram of a leucine zipper seen from the end. How does this diagram illustrate the relationship between the structure and function of the leucine zipper?
Step 1
Understand that it is a type of protein motif characterized by a repeating pattern of leucine residues that facilitate dimerization of proteins. Show more…
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The leucine zipper proteins frequently form heterodimers as well as homodimers. In a simple cartoon, show how two different leucine zipper proteins that can form a heterodimer with each other can be used to recognize three distinct (though related) sequences of DNA. Make the leucine zipper proteins look like hockey sticks, with the two different leucine zipper subunits represented by different color or shading (hollow versus filled). Show the DNA sequence recognized by each leucine zipper subunit as a box of the same shading as the subunit. Your answer should convey the mode of dimerization of leucine zipper proteins and the symmetry of the site to which the dimer binds.
In the image below, you see a section of DNA interacting with a DNA-binding protein. A portion of the DNA-binding protein forms a leucine zipper structure and, as the name implies, relies on the amino acid leucine for its proper structure. N = N-terminus and C = C-terminus. Describe the DNA-binding protein structure, making sure to reference any primary, secondary, tertiary, or quaternary levels you are seeing. In the leucine zipper structure, describe where you are more likely to find leucine. Explain your reasoning. Hint: Think about the name. Propose one amino acid substitution that would disrupt the leucine zipper structure and explain why.
Examine Figure $16.2 \mathrm{b}$. Why do you think the motif of the DNA-binding protein shown is called a zinc-finger motif?
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