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2. Below is an AlphaFold Predicted aligned error (PAE) plot that accompanies its predicted structure for an 831 amino acid protein. Aligned residue 0 100 200 300 400 500 600 700 800 0 100 200 300 400 500 600 700 800 Scored residue 0 5 10 15 20 25 30 Expected position error (Ångströms) a. Based on this plot, what are the rough residue ranges of the two well-ordered domains of this protein? b. Based on this plot, how many segments of this protein does AlphaFold predict to be disordered (not folded) in solution? What are their rough residue ranges?

          2. Below is an AlphaFold Predicted aligned error (PAE) plot that accompanies its predicted
structure for an 831 amino acid protein.
Aligned residue
0
100
200
300
400
500
600
700
800
0
100 200 300 400 500 600 700 800
Scored residue
0
5
10
15 20 25 30
Expected position error (Ångströms)
a. Based on this plot, what are the rough residue ranges of the two well-ordered
domains of this protein?
b. Based on this plot, how many segments of this protein does AlphaFold predict to be
disordered (not folded) in solution? What are their rough residue ranges?

Show more…

2. Below is an AlphaFold Predicted aligned error (PAE) plot that accompanies its predicted
structure for an 831 amino acid protein.
Aligned residue
0
100
200
300
400
500
600
700
800
0
100 200 300 400 500 600 700 800
Scored residue
0
5
10
15 20 25 30
Expected position error (Ångströms)
a. Based on this plot, what are the rough residue ranges of the two well-ordered
domains of this protein?
b. Based on this plot, how many segments of this protein does AlphaFold predict to be
disordered (not folded) in solution? What are their rough residue ranges?

Added by Evan P.

Biology for AP Courses

Julianne Zedalis, John Eggebrecht

Instant Answer

Solved by Expert Sri K

11/23/2022

Step 1

Step 1: To determine the rough residue ranges of the two well-ordered domains of the protein, we need to look for regions on the PAE plot where the expected position error (Angstroms) is low, indicating well-predicted regions. Show more…

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Below is an AlphaFold Predicted aligned error (PAE) plot that accompanies its predicted structure for an 831 amino acid protein. a. Based on this plot, what are the rough residue ranges of the two well-ordered domains of this protein? b. Based on this plot, how many segments of this protein does AlphaFold predict to be disordered (not folded) in solution? What are their rough residue ranges? 2. Below is an AlphaFold Predicted aligned error (PAE) plot that accompanies its predicted structure for an 831 amino acid protein. 100 200 300 400 500 600 700 Scored residue 10 15 20 25 Expected position error (Angstroms) a. Based on this plot, what are the rough residue ranges of the two well-ordered domains of this protein? b. Based on this plot, how many segments of this protein does AlphaFold predict to be disordered (not folded) in solution? What are their rough residue ranges?

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