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Describe a yeast two-hybrid assay for interaction between two known proteins.
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These proteins should have a potential interaction based on previous studies or predictions. Show more…
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The modular nature of eukaryotic activator proteins gave scientists an idea for a way to find proteins that interact with any particular protein of interest. The idea is to use the protein-protein interaction to bring together a DNA-binding region with an activation region, creating an artificial activator that consists of two polypeptides held together noncovalently by the interaction.The method is called the yeast two-hybrid system, and it has three components. First, the yeast contains a reporter gene construct in which $U A S_{G}$ (an enhancerlike sequence that binds the activator Gal4 as described in Problem 8 drives the expression of an $E$ coli lacZ reporter (encoding the enzyme B-galactosidase) from a yeast promoter. Second, the yeast also expresses a fusion protein in which the DNA-binding domain of Gal4 is fused to the protein of interest; this fusion protein is called the bait. The third component is a cDNA library made in plasmids, where each cDNA is fused in frame to the activation domain of Gal4, and these can be expressed in yeast cells as prey fusion proteins. How could you use a yeast strain containing the first two components, along with the plasmid cDNA expression library described, to identify prey proteins that bind to the bait protein? How is this procedure relevant to the goal of finding proteins that might interact with each other in the cell?
The yeast two-hybrid method is a powerful molecular genetic method to identify a protein(s) that interacts with a known protein or protein domain. You have isolated the glucocorticoid receptor (GR) and have evidence that it is a modular protein containing an activation domain, a DNAbinding domain, and a second ligand-binding activation domain. Further analysis reveals that in pituitary cells, the protein is anchored in the cytoplasm in the absence of its hormone ligand, a result leading you to spcculate that it binds to other inhibitory proteins. Describe how a two-hybrid analysis could be used to identify the protein(s) with which GR interacts. How would you specifically identify the domain in the GR that binds the inhibitor(s)?
Yeast Two-Hybrid Analysis You are a researcher who has just discovered a new protein in a fungus. Design a yeast two10. Yeast Two-Hybrid Analysis You are a researcher who has just discovered a new protein in a fungus. Design a yeast two-hybrid experiment to identify the other proteins in the fungal cell with which your protein interacts and explain how this could help you determine the function of your protein.-hybrid experiment to identify the other proteins in the fungal cell with which your protein interacts and explain how this could help you determine the function of your protein.
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